SNP Profiles matching PA 115 [PER]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	AT	AC	GG	CC	AC	GG	CC	AA	GG	AA	AA	CC	GG
1._RUQ_1576	_	_	AC	GG	CC	CC	GG	CC	AA	_	AA	AA	CC	GG
2._RUQ_1642	_	_	AC	GG	CC	CC	GG	CC	AA	_	AA	AA	CC	GG
3._RUQ_1642	_	_	AC	GG	CC	CC	GG	CC	AA	_	AA	AA	CC	GG
4._RUQ_1642	GG	AT	AC	GG	CC	CC	GG	CC	AA	GG	AA	AA	CC	GG
5._RUQ_1642	GG	AT	AC	GG	CC	CC	GG	CC	AA	GG	AA	AA	CC	GG
6._PA_195_[PER]	GG	AT	AC	GG	CC	CC	GG	CC	AA	GG	AA	AA	CC	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CC	TT	AA	TT	GG	CC	CC	CC	CG	AA	TT	GG	CC
1._RUQ_1576	CG	CC	TT	_	_	GG	CC	CC	_	_	_	_	AG	CC
2._RUQ_1642	CG	CC	TT	_	_	GG	CC	CC	_	_	_	_	AG	CC
3._RUQ_1642	CG	CC	TT	_	_	GG	CC	CC	_	_	_	_	AG	CC
4._RUQ_1642	CG	CC	TT	AA	_	GG	_	CC	CC	CG	AA	CC	AG	CC
5._RUQ_1642	CG	CC	TT	AA	_	GG	_	CC	CC	CG	AA	CC	AG	CC
6._PA_195_[PER]	CG	CC	TT	AA	_	GG	_	CC	CC	CG	AA	CC	AG	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AG	AA	CC	CC	TT	CT	AC	TT	CC	CG	GG	CC	X_X	X_X
1._RUQ_1576	_	_	_	_	TT	_	_	_	CC	CG	GG	_	X_X	X_X
2._RUQ_1642	_	_	_	_	TT	_	_	_	CC	CG	GG	_	X_X	X_X
3._RUQ_1642	_	_	_	_	TT	_	_	_	CC	CG	GG	_	X_X	X_X
4._RUQ_1642	AG	AA	CC	CC	TT	CC	CC	TT	CC	CG	GG	CC	X_X	X_X
5._RUQ_1642	AG	AA	CC	CC	TT	CC	CC	TT	CC	CG	GG	CC	X_X	X_X
6._PA_195_[PER]	AG	AA	_	CC	TT	CC	CC	TT	CC	CG	GG	CC	X_X	X_X

Input profile: PA_115_[PER]

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 324

Dapeng Zhang, 2014

1._PA_124_[PER] RUQ_1576

93.5 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._PA_195_[PER] RUQ_1642

93.5 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._PA_195_[PER] RUQ_1642

93.5 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

4._PA_195_[PER] RUQ_1642

90.8 %
38 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

5._PA_195_[PER] RUQ_1642

90.8 %
38 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

6._PA_195_[PER]

90.5 %
37 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B C165 T1

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP230	8	TcSNP242	9	TcSNP372	10	TcSNP429
11	TcSNP469	12	TcSNP529	13	TcSNP534	14	TcSNP560	15	TcSNP577
16	TcSNP591	17	TcSNP619	18	TcSNP645	19	TcSNP836	20	TcSNP872
21	TcSNP878	22	TcSNP891	23	TcSNP917	24	TcSNP929	25	TcSNP953
26	TcSNP994	27	TcSNP998	28	TcSNP1060	29	TcSNP1062	30	TcSNP1075
31	TcSNP1144	32	TcSNP1165	33	TcSNP1253	34	TcSNP1270	35	TcSNP1350
36	TcSNP1414	37	TcSNP1442	38	TcSNP1458	39	TcSNP1484	40	TcSNP1520